SpeciesAlias (cd2sbgnml 0.4.2 API)

java.lang.Object
- org.sbml._2001.ns.celldesigner.SpeciesAlias

public class SpeciesAlias
extends Object

For species aliases not forming complexes.

Java class for speciesAlias complex type.

The following schema fragment specifies the expected content contained within this class.

 <complexType name="speciesAlias">
   <complexContent>
     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
       <sequence>
         <element ref="{http://www.sbml.org/2001/ns/celldesigner}activity"/>
         <element name="bounds" type="{http://www.sbml.org/2001/ns/celldesigner}bounds"/>
         <element name="font">
           <complexType>
             <complexContent>
               <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
                 <attribute name="size" type="{http://www.w3.org/2001/XMLSchema}int" />
               </restriction>
             </complexContent>
           </complexType>
         </element>
         <element name="view" type="{http://www.sbml.org/2001/ns/celldesigner}view"/>
         <element name="structuralState" type="{http://www.sbml.org/2001/ns/celldesigner}structuralStateAngle" minOccurs="0"/>
         <element name="usualView" type="{http://www.sbml.org/2001/ns/celldesigner}usualView"/>
         <element name="briefView" type="{http://www.sbml.org/2001/ns/celldesigner}briefView"/>
         <element name="listOfSpeciesTag" type="{http://www.sbml.org/2001/ns/celldesigner}listOfSpeciesTag" minOccurs="0"/>
         <element name="info" type="{http://www.sbml.org/2001/ns/celldesigner}info"/>
       </sequence>
       <attribute name="id" use="required">
         <simpleType>
           <restriction base="{http://www.sbml.org/2001/ns/celldesigner}SId">
           </restriction>
         </simpleType>
       </attribute>
       <attribute name="species" use="required" type="{http://www.sbml.org/2001/ns/celldesigner}SId" />
       <attribute name="compartmentAlias">
         <simpleType>
           <restriction base="{http://www.sbml.org/2001/ns/celldesigner}SId">
           </restriction>
         </simpleType>
       </attribute>
       <attribute name="complexSpeciesAlias">
         <simpleType>
           <restriction base="{http://www.sbml.org/2001/ns/celldesigner}SId">
           </restriction>
         </simpleType>
       </attribute>
     </restriction>
   </complexContent>
 </complexType>

Nested Class Summary

Nested Classes
Modifier and Type Class and Description

static class SpeciesAlias.Font
Java class for anonymous complex type.

Nested Classes
Modifier and Type	Class and Description
`static class`	`SpeciesAlias.Font` Java class for anonymous complex type.

Field Summary

Fields
Modifier and Type	Field and Description
`protected String`	`activity`
`protected Bounds`	`bounds`
`protected BriefView`	`briefView`
`protected String`	`compartmentAlias`
`protected String`	`complexSpeciesAlias`
`protected SpeciesAlias.Font`	`font`
`protected String`	`id`
`protected Info`	`info`
`protected ListOfSpeciesTag`	`listOfSpeciesTag`
`protected String`	`species`
`protected StructuralStateAngle`	`structuralState`
`protected UsualView`	`usualView`
`protected View`	`view`

Constructor Summary

Constructors
Constructor and Description

SpeciesAlias()

Constructors
Constructor and Description
`SpeciesAlias()`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`String`	`getActivity()` Gets the value of the activity property.
`Bounds`	`getBounds()` Gets the value of the bounds property.
`BriefView`	`getBriefView()` Gets the value of the briefView property.
`String`	`getCompartmentAlias()` Gets the value of the compartmentAlias property.
`String`	`getComplexSpeciesAlias()` Gets the value of the complexSpeciesAlias property.
`SpeciesAlias.Font`	`getFont()` Gets the value of the font property.
`String`	`getId()` Gets the value of the id property.
`Info`	`getInfo()` Gets the value of the info property.
`ListOfSpeciesTag`	`getListOfSpeciesTag()` Gets the value of the listOfSpeciesTag property.
`String`	`getSpecies()` Gets the value of the species property.
`StructuralStateAngle`	`getStructuralState()` Gets the value of the structuralState property.
`UsualView`	`getUsualView()` Gets the value of the usualView property.
`View`	`getView()` Gets the value of the view property.
`void`	`setActivity(String value)` Sets the value of the activity property.
`void`	`setBounds(Bounds value)` Sets the value of the bounds property.
`void`	`setBriefView(BriefView value)` Sets the value of the briefView property.
`void`	`setCompartmentAlias(String value)` Sets the value of the compartmentAlias property.
`void`	`setComplexSpeciesAlias(String value)` Sets the value of the complexSpeciesAlias property.
`void`	`setFont(SpeciesAlias.Font value)` Sets the value of the font property.
`void`	`setId(String value)` Sets the value of the id property.
`void`	`setInfo(Info value)` Sets the value of the info property.
`void`	`setListOfSpeciesTag(ListOfSpeciesTag value)` Sets the value of the listOfSpeciesTag property.
`void`	`setSpecies(String value)` Sets the value of the species property.
`void`	`setStructuralState(StructuralStateAngle value)` Sets the value of the structuralState property.
`void`	`setUsualView(UsualView value)` Sets the value of the usualView property.
`void`	`setView(View value)` Sets the value of the view property.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - activity
```
protected String activity
```
  - bounds
```
protected Bounds bounds
```
  - font
```
protected SpeciesAlias.Font font
```
  - view
```
protected View view
```
  - structuralState
```
protected StructuralStateAngle structuralState
```
  - usualView
```
protected UsualView usualView
```
  - briefView
```
protected BriefView briefView
```
  - listOfSpeciesTag
```
protected ListOfSpeciesTag listOfSpeciesTag
```
  - info
```
protected Info info
```
  - id
```
protected String id
```
  - species
```
protected String species
```
  - compartmentAlias
```
protected String compartmentAlias
```
  - complexSpeciesAlias
```
protected String complexSpeciesAlias
```
- Constructor Detail
  - SpeciesAlias
```
public SpeciesAlias()
```
- Method Detail
  - getActivity
```
public String getActivity()
```
    Gets the value of the activity property.
    
    Returns:
    
    possible object is String
  - setActivity
```
public void setActivity(String value)
```
    Sets the value of the activity property.
    
    Parameters:
    
    value - allowed object is String
  - getBounds
```
public Bounds getBounds()
```
    Gets the value of the bounds property.
    
    Returns:
    
    possible object is Bounds
  - setBounds
```
public void setBounds(Bounds value)
```
    Sets the value of the bounds property.
    
    Parameters:
    
    value - allowed object is Bounds
  - getFont
```
public SpeciesAlias.Font getFont()
```
    Gets the value of the font property.
    
    Returns:
    
    possible object is SpeciesAlias.Font
  - setFont
```
public void setFont(SpeciesAlias.Font value)
```
    Sets the value of the font property.
    
    Parameters:
    
    value - allowed object is SpeciesAlias.Font
  - getView
```
public View getView()
```
    Gets the value of the view property.
    
    Returns:
    
    possible object is View
  - setView
```
public void setView(View value)
```
    Sets the value of the view property.
    
    Parameters:
    
    value - allowed object is View
  - getStructuralState
```
public StructuralStateAngle getStructuralState()
```
    Gets the value of the structuralState property.
    
    Returns:
    
    possible object is StructuralStateAngle
  - setStructuralState
```
public void setStructuralState(StructuralStateAngle value)
```
    Sets the value of the structuralState property.
    
    Parameters:
    
    value - allowed object is StructuralStateAngle
  - getUsualView
```
public UsualView getUsualView()
```
    Gets the value of the usualView property.
    
    Returns:
    
    possible object is UsualView
  - setUsualView
```
public void setUsualView(UsualView value)
```
    Sets the value of the usualView property.
    
    Parameters:
    
    value - allowed object is UsualView
  - getBriefView
```
public BriefView getBriefView()
```
    Gets the value of the briefView property.
    
    Returns:
    
    possible object is BriefView
  - setBriefView
```
public void setBriefView(BriefView value)
```
    Sets the value of the briefView property.
    
    Parameters:
    
    value - allowed object is BriefView
  - getListOfSpeciesTag
```
public ListOfSpeciesTag getListOfSpeciesTag()
```
    Gets the value of the listOfSpeciesTag property.
    
    Returns:
    
    possible object is ListOfSpeciesTag
  - setListOfSpeciesTag
```
public void setListOfSpeciesTag(ListOfSpeciesTag value)
```
    Sets the value of the listOfSpeciesTag property.
    
    Parameters:
    
    value - allowed object is ListOfSpeciesTag
  - getInfo
```
public Info getInfo()
```
    Gets the value of the info property.
    
    Returns:
    
    possible object is Info
  - setInfo
```
public void setInfo(Info value)
```
    Sets the value of the info property.
    
    Parameters:
    
    value - allowed object is Info
  - getId
```
public String getId()
```
    Gets the value of the id property.
    
    Returns:
    
    possible object is String
  - setId
```
public void setId(String value)
```
    Sets the value of the id property.
    
    Parameters:
    
    value - allowed object is String
  - getSpecies
```
public String getSpecies()
```
    Gets the value of the species property.
    
    Returns:
    
    possible object is String
  - setSpecies
```
public void setSpecies(String value)
```
    Sets the value of the species property.
    
    Parameters:
    
    value - allowed object is String
  - getCompartmentAlias
```
public String getCompartmentAlias()
```
    Gets the value of the compartmentAlias property.
    
    Returns:
    
    possible object is String
  - setCompartmentAlias
```
public void setCompartmentAlias(String value)
```
    Sets the value of the compartmentAlias property.
    
    Parameters:
    
    value - allowed object is String
  - getComplexSpeciesAlias
```
public String getComplexSpeciesAlias()
```
    Gets the value of the complexSpeciesAlias property.
    
    Returns:
    
    possible object is String
  - setComplexSpeciesAlias
```
public void setComplexSpeciesAlias(String value)
```
    Sets the value of the complexSpeciesAlias property.
    
    Parameters:
    
    value - allowed object is String

Class SpeciesAlias

Nested Class Summary

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

activity

bounds

font

view

structuralState

usualView

briefView

listOfSpeciesTag

info

id

species

compartmentAlias

complexSpeciesAlias

Constructor Detail

SpeciesAlias

Method Detail

getActivity

setActivity

getBounds

setBounds

getFont

setFont

getView

setView

getStructuralState

setStructuralState

getUsualView

setUsualView

getBriefView

setBriefView

getListOfSpeciesTag

setListOfSpeciesTag

getInfo

setInfo

getId

setId

getSpecies

setSpecies

getCompartmentAlias

setCompartmentAlias

getComplexSpeciesAlias

setComplexSpeciesAlias