BlockDiagram (cd2sbgnml 0.4.2 API)

java.lang.Object
- org.sbml._2001.ns.celldesigner.BlockDiagram

public class BlockDiagram
extends Object

Block diagram for a protein.

Java class for blockDiagram complex type.

The following schema fragment specifies the expected content contained within this class.

 <complexType name="blockDiagram">
   <complexContent>
     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
       <sequence>
         <element name="canvas" type="{http://www.sbml.org/2001/ns/celldesigner}canvas"/>
         <element name="block" type="{http://www.sbml.org/2001/ns/celldesigner}block"/>
         <element name="halo" type="{http://www.sbml.org/2001/ns/celldesigner}halo"/>
         <element name="listOfResiduesInBlockDiagram" type="{http://www.sbml.org/2001/ns/celldesigner}listOfResiduesInBlockDiagram"/>
         <element name="listOfExternalNamesForResidue" type="{http://www.sbml.org/2001/ns/celldesigner}listOfExternalNamesForResidue"/>
         <element name="listOfBindingSitesInBlockDiagram" type="{http://www.sbml.org/2001/ns/celldesigner}listOfBindingSitesInBlockDiagram"/>
         <element name="listOfEffectSitesInBlockDiagram" type="{http://www.sbml.org/2001/ns/celldesigner}listOfEffectSitesInBlockDiagram"/>
         <element name="degradedInBlockDiagram" type="{http://www.sbml.org/2001/ns/celldesigner}degradedInBlockDiagram" minOccurs="0"/>
         <element name="listOfInternalOperatorsInBlockDiagram" type="{http://www.sbml.org/2001/ns/celldesigner}listOfInternalOperatorsInBlockDiagram"/>
         <element name="listOfInternalLinksInBlockDiagram" type="{http://www.sbml.org/2001/ns/celldesigner}listOfInternalLinksInBlockDiagram"/>
       </sequence>
       <attribute name="protein" use="required">
         <simpleType>
           <restriction base="{http://www.sbml.org/2001/ns/celldesigner}SId">
           </restriction>
         </simpleType>
       </attribute>
     </restriction>
   </complexContent>
 </complexType>

Field Summary

Fields
Modifier and Type	Field and Description
`protected Block`	`block`
`protected Canvas`	`canvas`
`protected DegradedInBlockDiagram`	`degradedInBlockDiagram`
`protected Halo`	`halo`
`protected ListOfBindingSitesInBlockDiagram`	`listOfBindingSitesInBlockDiagram`
`protected ListOfEffectSitesInBlockDiagram`	`listOfEffectSitesInBlockDiagram`
`protected ListOfExternalNamesForResidue`	`listOfExternalNamesForResidue`
`protected ListOfInternalLinksInBlockDiagram`	`listOfInternalLinksInBlockDiagram`
`protected ListOfInternalOperatorsInBlockDiagram`	`listOfInternalOperatorsInBlockDiagram`
`protected ListOfResiduesInBlockDiagram`	`listOfResiduesInBlockDiagram`
`protected String`	`protein`

Constructor Summary

Constructors
Constructor and Description

BlockDiagram()

Constructors
Constructor and Description
`BlockDiagram()`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`Block`	`getBlock()` Gets the value of the block property.
`Canvas`	`getCanvas()` Gets the value of the canvas property.
`DegradedInBlockDiagram`	`getDegradedInBlockDiagram()` Gets the value of the degradedInBlockDiagram property.
`Halo`	`getHalo()` Gets the value of the halo property.
`ListOfBindingSitesInBlockDiagram`	`getListOfBindingSitesInBlockDiagram()` Gets the value of the listOfBindingSitesInBlockDiagram property.
`ListOfEffectSitesInBlockDiagram`	`getListOfEffectSitesInBlockDiagram()` Gets the value of the listOfEffectSitesInBlockDiagram property.
`ListOfExternalNamesForResidue`	`getListOfExternalNamesForResidue()` Gets the value of the listOfExternalNamesForResidue property.
`ListOfInternalLinksInBlockDiagram`	`getListOfInternalLinksInBlockDiagram()` Gets the value of the listOfInternalLinksInBlockDiagram property.
`ListOfInternalOperatorsInBlockDiagram`	`getListOfInternalOperatorsInBlockDiagram()` Gets the value of the listOfInternalOperatorsInBlockDiagram property.
`ListOfResiduesInBlockDiagram`	`getListOfResiduesInBlockDiagram()` Gets the value of the listOfResiduesInBlockDiagram property.
`String`	`getProtein()` Gets the value of the protein property.
`void`	`setBlock(Block value)` Sets the value of the block property.
`void`	`setCanvas(Canvas value)` Sets the value of the canvas property.
`void`	`setDegradedInBlockDiagram(DegradedInBlockDiagram value)` Sets the value of the degradedInBlockDiagram property.
`void`	`setHalo(Halo value)` Sets the value of the halo property.
`void`	`setListOfBindingSitesInBlockDiagram(ListOfBindingSitesInBlockDiagram value)` Sets the value of the listOfBindingSitesInBlockDiagram property.
`void`	`setListOfEffectSitesInBlockDiagram(ListOfEffectSitesInBlockDiagram value)` Sets the value of the listOfEffectSitesInBlockDiagram property.
`void`	`setListOfExternalNamesForResidue(ListOfExternalNamesForResidue value)` Sets the value of the listOfExternalNamesForResidue property.
`void`	`setListOfInternalLinksInBlockDiagram(ListOfInternalLinksInBlockDiagram value)` Sets the value of the listOfInternalLinksInBlockDiagram property.
`void`	`setListOfInternalOperatorsInBlockDiagram(ListOfInternalOperatorsInBlockDiagram value)` Sets the value of the listOfInternalOperatorsInBlockDiagram property.
`void`	`setListOfResiduesInBlockDiagram(ListOfResiduesInBlockDiagram value)` Sets the value of the listOfResiduesInBlockDiagram property.
`void`	`setProtein(String value)` Sets the value of the protein property.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - canvas
```
protected Canvas canvas
```
  - block
```
protected Block block
```
  - halo
```
protected Halo halo
```
  - listOfResiduesInBlockDiagram
```
protected ListOfResiduesInBlockDiagram listOfResiduesInBlockDiagram
```
  - listOfExternalNamesForResidue
```
protected ListOfExternalNamesForResidue listOfExternalNamesForResidue
```
  - listOfBindingSitesInBlockDiagram
```
protected ListOfBindingSitesInBlockDiagram listOfBindingSitesInBlockDiagram
```
  - listOfEffectSitesInBlockDiagram
```
protected ListOfEffectSitesInBlockDiagram listOfEffectSitesInBlockDiagram
```
  - degradedInBlockDiagram
```
protected DegradedInBlockDiagram degradedInBlockDiagram
```
  - listOfInternalOperatorsInBlockDiagram
```
protected ListOfInternalOperatorsInBlockDiagram listOfInternalOperatorsInBlockDiagram
```
  - listOfInternalLinksInBlockDiagram
```
protected ListOfInternalLinksInBlockDiagram listOfInternalLinksInBlockDiagram
```
  - protein
```
protected String protein
```
- Constructor Detail
  - BlockDiagram
```
public BlockDiagram()
```
- Method Detail
  - getCanvas
```
public Canvas getCanvas()
```
    Gets the value of the canvas property.
    
    Returns:
    
    possible object is Canvas
  - setCanvas
```
public void setCanvas(Canvas value)
```
    Sets the value of the canvas property.
    
    Parameters:
    
    value - allowed object is Canvas
  - getBlock
```
public Block getBlock()
```
    Gets the value of the block property.
    
    Returns:
    
    possible object is Block
  - setBlock
```
public void setBlock(Block value)
```
    Sets the value of the block property.
    
    Parameters:
    
    value - allowed object is Block
  - getHalo
```
public Halo getHalo()
```
    Gets the value of the halo property.
    
    Returns:
    
    possible object is Halo
  - setHalo
```
public void setHalo(Halo value)
```
    Sets the value of the halo property.
    
    Parameters:
    
    value - allowed object is Halo
  - getListOfResiduesInBlockDiagram
```
public ListOfResiduesInBlockDiagram getListOfResiduesInBlockDiagram()
```
    Gets the value of the listOfResiduesInBlockDiagram property.
    
    Returns:
    
    possible object is ListOfResiduesInBlockDiagram
  - setListOfResiduesInBlockDiagram
```
public void setListOfResiduesInBlockDiagram(ListOfResiduesInBlockDiagram value)
```
    Sets the value of the listOfResiduesInBlockDiagram property.
    
    Parameters:
    
    value - allowed object is ListOfResiduesInBlockDiagram
  - getListOfExternalNamesForResidue
```
public ListOfExternalNamesForResidue getListOfExternalNamesForResidue()
```
    Gets the value of the listOfExternalNamesForResidue property.
    
    Returns:
    
    possible object is ListOfExternalNamesForResidue
  - setListOfExternalNamesForResidue
```
public void setListOfExternalNamesForResidue(ListOfExternalNamesForResidue value)
```
    Sets the value of the listOfExternalNamesForResidue property.
    
    Parameters:
    
    value - allowed object is ListOfExternalNamesForResidue
  - getListOfBindingSitesInBlockDiagram
```
public ListOfBindingSitesInBlockDiagram getListOfBindingSitesInBlockDiagram()
```
    Gets the value of the listOfBindingSitesInBlockDiagram property.
    
    Returns:
    
    possible object is ListOfBindingSitesInBlockDiagram
  - setListOfBindingSitesInBlockDiagram
```
public void setListOfBindingSitesInBlockDiagram(ListOfBindingSitesInBlockDiagram value)
```
    Sets the value of the listOfBindingSitesInBlockDiagram property.
    
    Parameters:
    
    value - allowed object is ListOfBindingSitesInBlockDiagram
  - getListOfEffectSitesInBlockDiagram
```
public ListOfEffectSitesInBlockDiagram getListOfEffectSitesInBlockDiagram()
```
    Gets the value of the listOfEffectSitesInBlockDiagram property.
    
    Returns:
    
    possible object is ListOfEffectSitesInBlockDiagram
  - setListOfEffectSitesInBlockDiagram
```
public void setListOfEffectSitesInBlockDiagram(ListOfEffectSitesInBlockDiagram value)
```
    Sets the value of the listOfEffectSitesInBlockDiagram property.
    
    Parameters:
    
    value - allowed object is ListOfEffectSitesInBlockDiagram
  - getDegradedInBlockDiagram
```
public DegradedInBlockDiagram getDegradedInBlockDiagram()
```
    Gets the value of the degradedInBlockDiagram property.
    
    Returns:
    
    possible object is DegradedInBlockDiagram
  - setDegradedInBlockDiagram
```
public void setDegradedInBlockDiagram(DegradedInBlockDiagram value)
```
    Sets the value of the degradedInBlockDiagram property.
    
    Parameters:
    
    value - allowed object is DegradedInBlockDiagram
  - getListOfInternalOperatorsInBlockDiagram
```
public ListOfInternalOperatorsInBlockDiagram getListOfInternalOperatorsInBlockDiagram()
```
    Gets the value of the listOfInternalOperatorsInBlockDiagram property.
    
    Returns:
    
    possible object is ListOfInternalOperatorsInBlockDiagram
  - setListOfInternalOperatorsInBlockDiagram
```
public void setListOfInternalOperatorsInBlockDiagram(ListOfInternalOperatorsInBlockDiagram value)
```
    Sets the value of the listOfInternalOperatorsInBlockDiagram property.
    
    Parameters:
    
    value - allowed object is ListOfInternalOperatorsInBlockDiagram
  - getListOfInternalLinksInBlockDiagram
```
public ListOfInternalLinksInBlockDiagram getListOfInternalLinksInBlockDiagram()
```
    Gets the value of the listOfInternalLinksInBlockDiagram property.
    
    Returns:
    
    possible object is ListOfInternalLinksInBlockDiagram
  - setListOfInternalLinksInBlockDiagram
```
public void setListOfInternalLinksInBlockDiagram(ListOfInternalLinksInBlockDiagram value)
```
    Sets the value of the listOfInternalLinksInBlockDiagram property.
    
    Parameters:
    
    value - allowed object is ListOfInternalLinksInBlockDiagram
  - getProtein
```
public String getProtein()
```
    Gets the value of the protein property.
    
    Returns:
    
    possible object is String
  - setProtein
```
public void setProtein(String value)
```
    Sets the value of the protein property.
    
    Parameters:
    
    value - allowed object is String

Class BlockDiagram

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

canvas

block

halo

listOfResiduesInBlockDiagram

listOfExternalNamesForResidue

listOfBindingSitesInBlockDiagram

listOfEffectSitesInBlockDiagram

degradedInBlockDiagram

listOfInternalOperatorsInBlockDiagram

listOfInternalLinksInBlockDiagram

protein

Constructor Detail

BlockDiagram

Method Detail

getCanvas

setCanvas

getBlock

setBlock

getHalo

setHalo

getListOfResiduesInBlockDiagram

setListOfResiduesInBlockDiagram

getListOfExternalNamesForResidue

setListOfExternalNamesForResidue

getListOfBindingSitesInBlockDiagram

setListOfBindingSitesInBlockDiagram

getListOfEffectSitesInBlockDiagram

setListOfEffectSitesInBlockDiagram

getDegradedInBlockDiagram

setDegradedInBlockDiagram

getListOfInternalOperatorsInBlockDiagram

setListOfInternalOperatorsInBlockDiagram

getListOfInternalLinksInBlockDiagram

setListOfInternalLinksInBlockDiagram

getProtein

setProtein